EnhancerDB
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  3. rs79640091[chr16:85578451]
Enhancers that have rs79640091[chr16:85578451]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79640091[chr16:85578451]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85576695 85579765 ZNF143 GTRD no Epithelial (MCF-7) 21728577
chr16 85576724 85578754 ZNF274 GTRD no Bone Marrow (K562) 21728579
chr16 85576780 85578554 TCF7L2 GTRD no Colon (HCT116) 21728584
chr16 85577328 85578715 TCF7L2 GTRD no Colon (HCT116) 21728586
chr16 85578155 85579378 ZNF274 GTRD no Bone Marrow (K562) 21728592
chr16 85578338 85578821 ZNF274 GTRD no Bone Marrow (K562) 21728593
chr16 85578449 85578467 RARA JASPAR yes 12074508
Genes associated with rs79640091[chr16:85578451], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More