EnhancerDB
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  3. rs796467236[chr18:56672203]
Enhancers that have rs796467236[chr18:56672203]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56669724 56678355 enh17753
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Uterus Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
chr18 56672148 56672229 vista27640
VISTA
Transcript factors that have rs796467236[chr18:56672203]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56671700 56672336 ZNF143 GTRD no Epithelial (MCF-7) 108338709
chr18 56671754 56672240 ZNF143 GTRD no Epithelial (MCF-7) 108338710
chr18 56671778 56672204 ZNF143 GTRD no Epithelial (MCF-7) 108338711
chr18 56672197 56672218 IRF1 JASPAR yes 42716665
chr18 56672197 56672218 IRF1 JASPAR yes 110999642
chr18 56672200 56672221 IRF1 JASPAR yes 42716666
chr18 56672200 56672221 IRF1 JASPAR yes 110999643
chr18 56672201 56672222 IRF1 JASPAR yes 42716667
chr18 56672201 56672222 IRF1 JASPAR yes 110999644
chr18 56672202 56672217 FOXP1 JASPAR yes 42716668
chr18 56672202 56672217 FOXP1 JASPAR yes 110999645
chr18 56672202 56672223 IRF1 JASPAR yes 42716669
chr18 56672202 56672223 IRF1 JASPAR yes 110999646
chr18 56672203 56672218 FOXP1 JASPAR yes 42716670
chr18 56672203 56672218 FOXP1 JASPAR yes 110999647
chr18 56672203 56672224 IRF1 JASPAR yes 42716671
chr18 56672203 56672224 IRF1 JASPAR yes 110999648
Genes associated with rs796467236[chr18:56672203], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More