EnhancerDB
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  3. rs79647827[chr1:17886684]
Enhancers that have rs79647827[chr1:17886684]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs79647827[chr1:17886684]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17886682 17886697 NR2C2 JASPAR yes 27101808
chr1 17886683 17886693 SP1 JASPAR yes 27101809
chr1 17886684 17886694 SP1 JASPAR yes 27101810
Genes associated with rs79647827[chr1:17886684], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More