EnhancerDB
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  3. rs79648717[chr1:16496604]
Enhancers that have rs79648717[chr1:16496604]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79648717[chr1:16496604]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16496587 16496605 RARA JASPAR yes 27030689
chr1 16496595 16496611 E2F2 JASPAR yes 27030691
chr1 16496601 16496606 SP1 TRANSFAC yes 27030692
Genes associated with rs79648717[chr1:16496604], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More