EnhancerDB
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  3. rs796538189[chr17:55496890]
Enhancers that have rs796538189[chr17:55496890]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs796538189[chr17:55496890]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55496884 55496905 IRF1 JASPAR yes 54953358
chr17 55496885 55496906 IRF1 JASPAR yes 54953359
chr17 55496889 55496904 FOXP1 JASPAR yes 54953360
chr17 55496889 55496910 IRF1 JASPAR yes 54953361
chr17 55496890 55496905 FOXP1 JASPAR yes 54953362
chr17 55496890 55496911 IRF1 JASPAR yes 54953363
Genes associated with rs796538189[chr17:55496890], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More