EnhancerDB
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  3. rs796693053[chr1:54748945]
Enhancers that have rs796693053[chr1:54748945]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54748925 54759595 enh11865
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Stomach Muscle (A673) Placenta Uterus Pancreas Spleen Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs796693053[chr1:54748945]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54748938 54748949 CDX2 JASPAR yes 28968366
chr1 54748939 54748950 HOXA10 JASPAR yes 28968367
chr1 54748939 54748950 HOXC11 JASPAR yes 28968368
chr1 54748939 54748950 HOXC13 JASPAR yes 28968369
chr1 54748940 54748949 CDX1 JASPAR yes 28968370
chr1 54748940 54748950 HOXA13 JASPAR yes 28968371
chr1 54748940 54748950 HOXB13 JASPAR yes 28968372
chr1 54748940 54748950 HOXC10 JASPAR yes 28968373
chr1 54748940 54748950 HOXD11 JASPAR yes 28968374
chr1 54748940 54748950 HOXD13 JASPAR yes 28968375
chr1 54748942 54748957 FOXP1 JASPAR yes 28968376
chr1 54748943 54748958 FOXP1 JASPAR yes 28968377
chr1 54748943 54748964 IRF1 JASPAR yes 28968378
chr1 54748944 54748950 TBP TRANSFAC yes 28968379
chr1 54748944 54748959 FOXP1 JASPAR yes 28968380
chr1 54748944 54748965 IRF1 JASPAR yes 28968381
chr1 54748945 54748960 FOXP1 JASPAR yes 28968382
chr1 54748945 54748966 IRF1 JASPAR yes 28968383
Genes associated with rs796693053[chr1:54748945], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More