EnhancerDB
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  3. rs79672965[chr17:64549100]
Enhancers that have rs79672965[chr17:64549100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 64532553 64550230 enh4536
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs79672965[chr17:64549100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 64549089 64549102 POU3F3 JASPAR yes 55447958
chr17 64549090 64549102 POU2F1 JASPAR yes 55447959
chr17 64549095 64549116 IRF1 JASPAR yes 55447960
chr17 64549096 64549108 FOXC2 JASPAR yes 55447961
chr17 64549097 64549108 FOXC1 JASPAR yes 55447962
chr17 64549097 64549112 PRDM1 JASPAR yes 55447963
chr17 64549098 64549102 YY1 TRANSFAC yes 55447964
chr17 64549098 64549112 STAT1 JASPAR yes 55447965
chr17 64549099 64549120 IRF1 JASPAR yes 55447966
chr17 64549100 64549115 FOXP1 JASPAR yes 55447967
Genes associated with rs79672965[chr17:64549100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More