EnhancerDB
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  3. rs796915275[chr17:40400393]
Enhancers that have rs796915275[chr17:40400393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40390345 40414201 enh4414
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Heart
Transcript factors that have rs796915275[chr17:40400393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40398586 40401546 ZBTB33 GTRD no Lung (A549) 108259994
chr17 40400388 40400393 TFAP2A TRANSFAC yes 54289230
chr17 40400388 40400394 MZF1 JASPAR yes 54289231
chr17 40400390 40400411 IRF1 JASPAR yes 54289232
chr17 40400391 40401075 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21758449
chr17 40400391 40401075 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108259995
chr17 40400393 40400408 FOXP1 JASPAR yes 54289233
Genes associated with rs796915275[chr17:40400393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More