EnhancerDB
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  3. rs79696258[chr12:53284859]
Enhancers that have rs79696258[chr12:53284859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53249369 53285465 enh14733
Bone Marrow (K562) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs79696258[chr12:53284859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53284842 53284863 IRF1 JASPAR yes 120960347
chr12 53284846 53284861 FOXP1 JASPAR yes 120960348
chr12 53284849 53284870 IRF1 JASPAR yes 120960349
chr12 53284854 53284875 IRF1 JASPAR yes 120960350
chr12 53284857 53284871 IRF7 JASPAR yes 120960351
chr12 53284857 53285407 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21548133
chr12 53284857 53285407 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108034873
Genes associated with rs79696258[chr12:53284859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More