EnhancerDB
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  3. rs7971996[chr12:52609032]
Enhancers that have rs7971996[chr12:52609032]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs7971996[chr12:52609032]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 21546725
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 108033682
chr12 52608819 52609602 ZNF143 GTRD no Epithelial (MCF-7) 21546767
chr12 52608819 52609602 ZNF143 GTRD no Epithelial (MCF-7) 108033683
chr12 52609019 52609032 NFKB1 JASPAR yes 120928998
chr12 52609019 52609032 NFKB2 JASPAR yes 120928999
chr12 52609022 52609033 CEBPB JASPAR yes 120929000
chr12 52609025 52609037 YY1 JASPAR yes 120929001
Genes associated with rs7971996[chr12:52609032], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More