EnhancerDB
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  3. rs79724587[chr1:178629360]
Enhancers that have rs79724587[chr1:178629360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178606845 178636895 enh759
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Large Intestine Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs79724587[chr1:178629360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178629189 178629519 ZNF143 GTRD no Epithelial (MCF-7) 21352859
chr1 178629212 178629553 SOX2 GTRD no Neural Stem Cells (H9) 21352860
chr1 178629226 178629473 SOX2 GTRD no Neural Stem Cells (H9) 21352861
chr1 178629279 178629835 ZNF143 GTRD no Epithelial (MCF-7) 21352862
chr1 178629357 178629363 MZF1 JASPAR yes 33435170
Genes associated with rs79724587[chr1:178629360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More