EnhancerDB
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Enhancers that have rs7972661[chr12:52609302]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 52609215 52609817 vista13467
VISTA
Transcript factors that have rs7972661[chr12:52609302]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 21546725
chr12 52606625 52609363 ZNF143 GTRD no Epithelial (MCF-7) 108033682
chr12 52608819 52609602 ZNF143 GTRD no Epithelial (MCF-7) 21546767
chr12 52608819 52609602 ZNF143 GTRD no Epithelial (MCF-7) 108033683
chr12 52609121 52609777 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033684
chr12 52609156 52609467 ZNF274 GTRD no Liver (HepG2) 108033685
chr12 52609158 52609818 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546768
chr12 52609158 52609818 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033686
chr12 52609193 52609733 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033687
chr12 52609238 52609814 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033688
chr12 52609261 52609665 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546769
chr12 52609261 52609665 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033689
chr12 52609264 52609640 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546770
chr12 52609264 52609640 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033690
chr12 52609269 52609746 MYC UCSC Txn Factor no Conserved 108033691
chr12 52609284 52609934 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546771
chr12 52609284 52609934 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033692
chr12 52609291 52609755 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546772
chr12 52609291 52609755 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108033693
chr12 52609298 52609742 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21546773
chr12 52609298 52609742 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108033694
Genes associated with rs7972661[chr12:52609302], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More