EnhancerDB
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  3. rs7973186[chr12:52546200]
Enhancers that have rs7973186[chr12:52546200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52531174 52553795 enh2357
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs7973186[chr12:52546200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52545563 52546213 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546480
chr12 52545563 52546213 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033283
chr12 52545601 52546261 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546481
chr12 52545601 52546261 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033284
chr12 52545652 52546332 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546483
chr12 52545652 52546332 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033288
chr12 52545669 52546209 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033290
chr12 52545722 52546427 POLR2A UCSC Txn Factor no Conserved 108033295
chr12 52545743 52546227 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033297
chr12 52545768 52546344 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033298
chr12 52545781 52546217 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033299
chr12 52545812 52546595 ZBTB33 GTRD no Lung (A549) 108033300
chr12 52545821 52546472 TCF7L2 GTRD no Colon (HCT116) 21546488
chr12 52545821 52546472 TCF7L2 GTRD no Colon (HCT116) 108033302
chr12 52545831 52546209 CTCF UCSC Txn Factor no Conserved 108033303
chr12 52545834 52546230 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546489
chr12 52545834 52546230 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033304
chr12 52545835 52546299 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546490
chr12 52545835 52546299 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033305
chr12 52545844 52546204 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108033306
chr12 52545847 52546819 ZBTB33 GTRD no Lung (A549) 108033310
chr12 52545871 52546241 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108033312
chr12 52545872 52546561 ZNF274 GTRD no Bone Marrow (K562) 108033313
chr12 52545882 52546272 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108033315
chr12 52545884 52546348 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546492
chr12 52545884 52546348 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108033316
chr12 52545887 52546263 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546493
chr12 52545887 52546263 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033317
chr12 52545893 52546269 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546494
chr12 52545893 52546269 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108033318
chr12 52545899 52546229 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108033321
chr12 52545910 52546200 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108033324
chr12 52545931 52546287 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546500
chr12 52545931 52546287 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033331
chr12 52545942 52546626 ZNF274 GTRD no Bone Marrow (K562) 108033337
chr12 52545964 52546329 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546503
chr12 52545964 52546329 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033340
chr12 52545974 52546284 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108033341
chr12 52545976 52546286 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033343
chr12 52545982 52546262 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033344
chr12 52545992 52546302 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108033346
chr12 52545992 52546529 ZNF274 GTRD no Bone Marrow (K562) 108033347
chr12 52546017 52546373 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108033348
chr12 52546026 52546290 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546504
chr12 52546026 52546290 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033349
chr12 52546036 52546238 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546505
chr12 52546036 52546238 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033350
chr12 52546045 52546697 ZNF143 GTRD no Epithelial (MCF-7) 21546506
chr12 52546045 52546697 ZNF143 GTRD no Epithelial (MCF-7) 108033351
chr12 52546072 52546557 ZNF274 GTRD no Bone Marrow (K562) 108033352
chr12 52546085 52546512 ZNF274 GTRD no Bone Marrow (K562) 108033353
chr12 52546097 52546528 ZNF274 GTRD no Bone Marrow (K562) 108033354
chr12 52546111 52546263 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108033355
chr12 52546138 52546568 TCF7L2 GTRD no Colon (HCT116) 21546507
chr12 52546150 52547035 ZNF143 GTRD no Epithelial (MCF-7) 21546508
chr12 52546152 52546612 ZNF143 GTRD no Epithelial (MCF-7) 21546509
chr12 52546169 52546718 TCF7L2 GTRD no Colon (HCT116) 21546510
chr12 52546191 52546209 TP53 JASPAR yes 120922565
chr12 52546191 52546209 TP63 JASPAR yes 120922566
chr12 52546191 52546209 TP73 JASPAR yes 120922567
chr12 52546193 52546208 TP53 JASPAR yes 120922568
chr12 52546194 52546203 THAP1 JASPAR yes 120922569
chr12 52546194 52546214 ESR1 JASPAR yes 120922570
Genes associated with rs7973186[chr12:52546200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More