EnhancerDB
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  3. rs79783475[chr12:54833839]
Enhancers that have rs79783475[chr12:54833839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54815065 54835675 enh14748
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs79783475[chr12:54833839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54833837 54833847 ID4 JASPAR yes 121042819
chr12 54833837 54833847 TCF4 JASPAR yes 121042820
Genes associated with rs79783475[chr12:54833839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 54849734 54867386 - GTSF1 ENSG00000170627.5 54867386 15895 Thyroid 1.38507e-22 12152