EnhancerDB
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  3. rs7978443[chr12:50942163]
Enhancers that have rs7978443[chr12:50942163]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs7978443[chr12:50942163]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50942152 50942164 FOXI1 JASPAR yes 120842167
chr12 50942153 50942165 FOXC2 JASPAR yes 120842168
chr12 50942155 50942166 FOXA1 JASPAR yes 120842169
chr12 50942158 50942170 FOXI1 JASPAR yes 120842170
chr12 50942161 50942165 YY1 TRANSFAC yes 120842171
Genes associated with rs7978443[chr12:50942163], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More