EnhancerDB
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  3. rs79788867[chr2:121686888]
Enhancers that have rs79788867[chr2:121686888]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 121660105 121703500 enh18849
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79788867[chr2:121686888]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 121686884 121686900 POU4F2 JASPAR yes 76590158
chr2 121686884 121686900 POU4F3 JASPAR yes 76590159
chr2 121686885 121686897 HNF1B JASPAR yes 76590160
chr2 121686887 121686897 EMX1 JASPAR yes 76590161
chr2 121686887 121686897 GSX1 JASPAR yes 76590162
chr2 121686887 121686897 GSX2 JASPAR yes 76590163
chr2 121686887 121686897 HOXB2 JASPAR yes 76590164
chr2 121686887 121686897 MEOX1 JASPAR yes 76590165
chr2 121686887 121686897 MEOX2 JASPAR yes 76590166
chr2 121686887 121686897 POU6F1 JASPAR yes 76590167
chr2 121686888 121686896 LMX1A JASPAR yes 76590168
chr2 121686888 121686896 LMX1B JASPAR yes 76590169
chr2 121686888 121686896 NKX6-1 JASPAR yes 76590170
chr2 121686888 121686896 NKX6-2 JASPAR yes 76590171
chr2 121686888 121686896 PDX1 JASPAR yes 76590172
chr2 121686888 121686896 VAX1 JASPAR yes 76590173
chr2 121686888 121686896 VAX2 JASPAR yes 76590174
chr2 121686888 121686896 VSX1 JASPAR yes 76590175
Genes associated with rs79788867[chr2:121686888], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More