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- rs79796885[chr16:1239144]
Enhancers that have rs79796885[chr16:1239144]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
1228905 |
1244901 |
enh31664 |
|
|
Transcript factors that have rs79796885[chr16:1239144]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
1238471
|
1239288
|
REST
|
UCSC Txn Factor
|
no
|
Conserved
|
108171298
|
|
|
chr16
|
1238471
|
1239288
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108171299
|
|
|
chr16
|
1238536
|
1239318
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108171300
|
|
|
chr16
|
1238560
|
1239220
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108171301
|
|
|
chr16
|
1238650
|
1239248
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
108171302
|
|
|
chr16
|
1238652
|
1239215
|
TCF7L2
|
ENCODE Uniform TFBS
|
no
|
Pancreas (Panc1)
|
108171303
|
|
|
chr16
|
1238847
|
1239332
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21684336
|
|
|
chr16
|
1238847
|
1239332
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108171304
|
|
|
chr16
|
1238849
|
1239316
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108171305
|
|
|
chr16
|
1238929
|
1239230
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108171306
|
|
|
chr16
|
1239138
|
1239151
|
SCRT2
|
JASPAR
|
yes
|
|
9144224
|
|
|
chr16
|
1239140
|
1239153
|
ELF1
|
JASPAR
|
yes
|
|
9144225
|
|
|
chr16
|
1239142
|
1239153
|
ETV2
|
JASPAR
|
yes
|
|
9144226
|
|
|
chr16
|
1239143
|
1239153
|
GABPA
|
JASPAR
|
yes
|
|
9144227
|
|
|
chr16
|
1239143
|
1239154
|
FLI1
|
JASPAR
|
yes
|
|
9144228
|
|
Genes associated with rs79796885[chr16:1239144], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr16
|
718086
|
724174
|
+
|
RHOT2
|
ENSG00000140983.9
|
718086
|
514970
|
Spleen
|
0.14209
|
14357
|
|