EnhancerDB
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  3. rs79851998[chr19:13959323]
Enhancers that have rs79851998[chr19:13959323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr19 13957204 13959386 vista28720
VISTA
Transcript factors that have rs79851998[chr19:13959323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13958884 13959324 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852519
chr19 13958884 13959324 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108390511
chr19 13958960 13961534 TCF7L2 GTRD no Colon (HCT116) 21852522
chr19 13958960 13961534 TCF7L2 GTRD no Colon (HCT116) 108390514
chr19 13958960 13961534 TCF7L2 GTRD no Colon (HCT116) 108390515
chr19 13958977 13961555 TCF7L2 GTRD no Colon (HCT116) 21852523
chr19 13958977 13961555 TCF7L2 GTRD no Colon (HCT116) 108390517
chr19 13958977 13961555 TCF7L2 GTRD no Colon (HCT116) 108390518
chr19 13959010 13959437 TCF7L2 GTRD no Colon (HCT116) 21852525
chr19 13959010 13959437 TCF7L2 GTRD no Colon (HCT116) 108390520
chr19 13959035 13961421 ZNF143 GTRD no Epithelial (MCF-7) 21852526
chr19 13959035 13961421 ZNF143 GTRD no Epithelial (MCF-7) 108390521
chr19 13959035 13961421 ZNF143 GTRD no Epithelial (MCF-7) 108390522
chr19 13959042 13959797 TCF7L2 GTRD no Colon (HCT116) 21852527
chr19 13959042 13959797 TCF7L2 GTRD no Colon (HCT116) 108390523
chr19 13959105 13960270 TCF7L2 GTRD no Colon (HCT116) 21852528
chr19 13959105 13960270 TCF7L2 GTRD no Colon (HCT116) 108390524
chr19 13959105 13960270 TCF7L2 GTRD no Colon (HCT116) 108390525
chr19 13959165 13959783 ZNF274 GTRD no Bone Marrow (K562) 21852529
chr19 13959165 13959783 ZNF274 GTRD no Bone Marrow (K562) 108390526
chr19 13959170 13961220 ZNF143 GTRD no Epithelial (MCF-7) 21852530
chr19 13959170 13961220 ZNF143 GTRD no Epithelial (MCF-7) 108390527
chr19 13959170 13961220 ZNF143 GTRD no Epithelial (MCF-7) 108390528
chr19 13959174 13961648 ZNF143 GTRD no Epithelial (MCF-7) 21852531
chr19 13959174 13961648 ZNF143 GTRD no Epithelial (MCF-7) 108390529
chr19 13959174 13961648 ZNF143 GTRD no Epithelial (MCF-7) 108390530
chr19 13959187 13959874 ZNF274 GTRD no Blood (GM12878) 21852532
chr19 13959187 13959874 ZNF274 GTRD no Blood (GM12878) 108390531
chr19 13959245 13961705 TCF7L2 GTRD no Colon (HCT116) 21852533
chr19 13959245 13961705 TCF7L2 GTRD no Colon (HCT116) 108390532
chr19 13959245 13961705 TCF7L2 GTRD no Colon (HCT116) 108390533
chr19 13959301 13959775 ZNF274 GTRD no Bone Marrow (K562) 21852534
chr19 13959301 13959775 ZNF274 GTRD no Bone Marrow (K562) 108390534
chr19 13959321 13959325 YY1 TRANSFAC yes 70810817
chr19 13959321 13959325 YY1 TRANSFAC yes 112538048
Genes associated with rs79851998[chr19:13959323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More