EnhancerDB
  1. Home
  2. SNP
  3. rs79865389[chr17:62689516]
Enhancers that have rs79865389[chr17:62689516]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62688405 62713087 enh17300
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79865389[chr17:62689516]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62687737 62691399 ZNF143 GTRD no Epithelial (MCF-7) 21778957
chr17 62687749 62691357 TCF7L2 GTRD no Colon (HCT116) 21778958
chr17 62687783 62691374 ZNF143 GTRD no Epithelial (MCF-7) 21778959
chr17 62687797 62691593 ZNF143 GTRD no Epithelial (MCF-7) 21778960
chr17 62687810 62695569 ZNF143 GTRD no Epithelial (MCF-7) 21778961
chr17 62687873 62694535 ZNF143 GTRD no Epithelial (MCF-7) 21778963
chr17 62687878 62695454 ZNF143 GTRD no Epithelial (MCF-7) 21778964
chr17 62687993 62695445 ZNF143 GTRD no Epithelial (MCF-7) 21778965
chr17 62688394 62691502 TCF7L2 GTRD no Colon (HCT116) 21778973
chr17 62688432 62689798 ZNF143 GTRD no Epithelial (MCF-7) 21778974
chr17 62688476 62690874 TCF7L2 GTRD no Colon (HCT116) 21778975
chr17 62689367 62690291 TCF7L2 GTRD no Colon (HCT116) 21778979
chr17 62689369 62691317 TCF7L2 GTRD no Colon (HCT116) 21778980
chr17 62689395 62689985 TCF7L2 GTRD no Colon (HCT116) 21778981
chr17 62689440 62691294 TCF7L2 GTRD no Colon (HCT116) 21778982
chr17 62689456 62691341 ZNF143 GTRD no Epithelial (MCF-7) 21778983
chr17 62689463 62690118 TCF7L2 GTRD no Colon (HCT116) 21778984
chr17 62689481 62689978 TCF7L2 GTRD no Colon (HCT116) 21778985
chr17 62689510 62689525 MEF2A JASPAR yes 55312453
chr17 62689511 62689526 MEF2C JASPAR yes 55312454
chr17 62689512 62689524 MEF2A JASPAR yes 55312455
chr17 62689512 62689524 MEF2B JASPAR yes 55312456
chr17 62689512 62689524 MEF2D JASPAR yes 55312457
chr17 62689514 62689518 YY1 TRANSFAC yes 55312458
Genes associated with rs79865389[chr17:62689516], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More