EnhancerDB
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  3. rs79866628[chr1:41415208]
Enhancers that have rs79866628[chr1:41415208]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41400705 41424275 enh11780
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Liver Bone (Osteoblast) Placenta Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Uterus Stomach
Transcript factors that have rs79866628[chr1:41415208]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41415190 41415211 IRF1 JASPAR yes 28358670
chr1 41415196 41415211 FOXP1 JASPAR yes 28358672
chr1 41415196 41415217 IRF1 JASPAR yes 28358673
chr1 41415197 41415218 IRF1 JASPAR yes 28358674
chr1 41415202 41415223 IRF1 JASPAR yes 28358676
chr1 41415203 41415218 FOXP1 JASPAR yes 28358677
chr1 41415204 41415219 STAT2 JASPAR yes 28358678
chr1 41415207 41415228 IRF1 JASPAR yes 28358679
chr1 41415208 41415223 FOXP1 JASPAR yes 28358680
Genes associated with rs79866628[chr1:41415208], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More