EnhancerDB
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  3. rs79895546[chr17:38669956]
Enhancers that have rs79895546[chr17:38669956]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79895546[chr17:38669956]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38669446 38670149 ZNF274 GTRD no Bone Marrow (K562) 21754337
chr17 38669463 38670067 ZNF274 GTRD no Liver (HepG2) 21754338
chr17 38669567 38670224 TCF7L2 GTRD no Colon (HCT116) 21754339
chr17 38669742 38669989 ZNF143 GTRD no Epithelial (MCF-7) 21754340
chr17 38669950 38669968 NR3C1 JASPAR yes 54219781
chr17 38669951 38669968 NR3C2 JASPAR yes 54219782
chr17 38669952 38669972 ESR1 JASPAR yes 54219783
Genes associated with rs79895546[chr17:38669956], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More