EnhancerDB
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  3. rs79952544[chr12:125381786]
Enhancers that have rs79952544[chr12:125381786]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125380716 125396135 enh2679
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs79952544[chr12:125381786]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125380477 125382882 ZNF274 GTRD no Bone Marrow (K562) 21583218
chr12 125380847 125381830 ZNF274 GTRD no Blood (GM12878) 21583220
chr12 125381063 125382115 ZNF274 GTRD no Liver (HepG2) 21583222
chr12 125381090 125382009 ZNF274 GTRD no Blood (GM12878) 21583225
chr12 125381162 125382071 ZNF274 GTRD no Cervix (HeLa-S3) 21583226
chr12 125381172 125382073 ZNF274 GTRD no Bone Marrow (K562) 21583227
chr12 125381207 125382016 ZNF274 GTRD no Bone Marrow (K562) 21583228
chr12 125381215 125381965 ZNF274 GTRD no Liver (HepG2) 21583229
chr12 125381257 125381949 ZNF274 GTRD no Blood (GM12878) 21583230
chr12 125381265 125382073 ZNF143 GTRD no Epithelial (MCF-7) 21583231
chr12 125381305 125381845 ZBTB33 GTRD no Brain (SK-N-SH) 21583232
chr12 125381387 125381831 ZNF274 GTRD no Blood (GM12878) 21583233
chr12 125381471 125381853 ZNF274 GTRD no Liver (HepG2) 21583235
chr12 125381765 125381843 ZNF274 GTRD no Bone Marrow (K562) 21583237
chr12 125381774 125381795 IRF1 JASPAR yes 124430706
chr12 125381775 125381796 IRF1 JASPAR yes 124430707
chr12 125381777 125381791 IRF7 JASPAR yes 124430708
chr12 125381779 125381791 IRF1 JASPAR yes 124430709
chr12 125381780 125381801 IRF1 JASPAR yes 124430710
chr12 125381781 125381802 IRF1 JASPAR yes 124430711
chr12 125381785 125381806 IRF1 JASPAR yes 124430712
Genes associated with rs79952544[chr12:125381786], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More