EnhancerDB
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Enhancers that have rs79954005[chr1:185613655]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185611645 185629075 enh12480
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs79954005[chr1:185613655]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185613639 185613656 ZNF410 JASPAR yes 33829731
chr1 185613648 185613663 HNF1A JASPAR yes 33829732
chr1 185613649 185613662 HNF1B JASPAR yes 33829733
chr1 185613649 185613663 POU4F1 JASPAR yes 33829734
chr1 185613649 185613665 POU4F2 JASPAR yes 33829735
chr1 185613649 185613665 POU4F3 JASPAR yes 33829736
chr1 185613650 185613666 POU4F3 JASPAR yes 33829737
chr1 185613652 185613656 TEAD2 TRANSFAC yes 33829738
chr1 185613652 185613662 MNX1 JASPAR yes 33829739
chr1 185613652 185613662 POU6F1 JASPAR yes 33829740
chr1 185613652 185613666 POU4F1 JASPAR yes 33829741
chr1 185613652 185613667 HNF1A JASPAR yes 33829742
chr1 185613653 185613661 LMX1A JASPAR yes 33829743
chr1 185613653 185613661 LMX1B JASPAR yes 33829744
chr1 185613653 185613661 NKX6-1 JASPAR yes 33829745
chr1 185613653 185613661 NKX6-2 JASPAR yes 33829746
chr1 185613653 185613661 VAX1 JASPAR yes 33829747
chr1 185613653 185613661 VAX2 JASPAR yes 33829748
chr1 185613653 185613661 VSX1 JASPAR yes 33829749
chr1 185613653 185613661 VSX2 JASPAR yes 33829750
chr1 185613653 185613667 POU4F1 JASPAR yes 33829751
chr1 185613653 185613669 POU4F2 JASPAR yes 33829752
chr1 185613653 185613669 POU4F3 JASPAR yes 33829753
chr1 185613654 185613664 PAX3 JASPAR yes 33829754
chr1 185613654 185613664 PAX7 JASPAR yes 33829755
chr1 185613654 185613665 PHOX2A JASPAR yes 33829756
chr1 185613654 185613665 PROP1 JASPAR yes 33829757
chr1 185613655 185613669 POU4F1 JASPAR yes 33829758
chr1 185613655 185613670 HNF1A JASPAR yes 33829759
Genes associated with rs79954005[chr1:185613655], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More