EnhancerDB
  1. Home
  2. SNP
  3. rs79955594[chr1:25063034]
Enhancers that have rs79955594[chr1:25063034]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs79955594[chr1:25063034]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25063031 25063046 TFAP2A JASPAR yes 27525369
chr1 25063031 25063046 TFAP2C JASPAR yes 27525370
chr1 25063033 25063048 TFAP2C JASPAR yes 27525371
chr1 25063034 25063045 TFAP2A JASPAR yes 27525372
chr1 25063034 25063045 TFAP2B JASPAR yes 27525373
chr1 25063034 25063045 TFAP2C JASPAR yes 27525374
Genes associated with rs79955594[chr1:25063034], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More