EnhancerDB
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  3. rs80028866[chr17:57916095]
Enhancers that have rs80028866[chr17:57916095]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57914612 57916949 vista707
VISTA
chr17 57915645 57936791 enh17263
Astrocyte Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs80028866[chr17:57916095]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57914548 57924655 POLR2A UCSC Txn Factor no Conserved 107688742
chr17 57914548 57924655 POLR2A UCSC Txn Factor no Conserved 108278238
chr17 57914681 57919281 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107688747
chr17 57914695 57916213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776390
chr17 57914695 57916213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107688750
chr17 57914699 57916172 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107688751
chr17 57914738 57919309 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776391
chr17 57914738 57919309 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107688752
chr17 57914924 57919014 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107688776
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 21776393
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 107688870
chr17 57915107 57924168 ZNF143 GTRD no Epithelial (MCF-7) 108278239
chr17 57915182 57916489 CHD1 UCSC Txn Factor no Conserved 107688914
chr17 57915182 57916489 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107688915
chr17 57915447 57916239 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21776399
chr17 57915447 57916239 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107688948
chr17 57915650 57919139 ZNF143 GTRD no Epithelial (MCF-7) 21776406
chr17 57915650 57919139 ZNF143 GTRD no Epithelial (MCF-7) 107688962
chr17 57915689 57916193 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107688963
chr17 57915711 57916195 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107688966
chr17 57915797 57916207 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107688967
chr17 57915831 57916161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21776408
chr17 57915831 57916161 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107688968
chr17 57915969 57918983 ZBTB33 GTRD no Lung (A549) 107688969
chr17 57915998 57916281 ZNF274 GTRD no Blood (GM12878) 21776409
chr17 57915998 57916281 ZNF274 GTRD no Blood (GM12878) 107688970
chr17 57916007 57916653 TCF7L2 GTRD no Colon (HCT116) 107688971
chr17 57916009 57916509 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107688972
chr17 57916014 57916676 TCF7L2 GTRD no Colon (HCT116) 107688973
chr17 57916020 57917223 TCF7L2 GTRD no Colon (HCT116) 107688974
chr17 57916032 57916815 ZNF143 GTRD no Epithelial (MCF-7) 21776410
chr17 57916032 57916815 ZNF143 GTRD no Epithelial (MCF-7) 107688975
chr17 57916035 57916824 ZNF143 GTRD no Epithelial (MCF-7) 21776411
chr17 57916035 57916824 ZNF143 GTRD no Epithelial (MCF-7) 107688976
chr17 57916041 57918567 ZNF143 GTRD no Epithelial (MCF-7) 21776412
chr17 57916041 57918567 ZNF143 GTRD no Epithelial (MCF-7) 107688977
chr17 57916051 57916421 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107688978
chr17 57916056 57916757 TCF7L2 GTRD no Colon (HCT116) 107688979
chr17 57916063 57919213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21776413
chr17 57916063 57919213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107688980
chr17 57916069 57918863 ZNF143 GTRD no Epithelial (MCF-7) 21776414
chr17 57916069 57918863 ZNF143 GTRD no Epithelial (MCF-7) 107688981
chr17 57916088 57916833 ZNF143 GTRD no Epithelial (MCF-7) 21776415
chr17 57916088 57916833 ZNF143 GTRD no Epithelial (MCF-7) 107688982
chr17 57916089 57916095 SOX10 JASPAR yes 16870
chr17 57916089 57916095 SOX10 JASPAR yes 55087273
Genes associated with rs80028866[chr17:57916095], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More