EnhancerDB
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  3. rs80034408[chr1:229229557]
Enhancers that have rs80034408[chr1:229229557]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229225622 229286295 enh12760
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr1 229229415 229229758 vista5448
VISTA
Transcript factors that have rs80034408[chr1:229229557]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 21389897
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 107877686
chr1 229228744 229232100 ZNF274 GTRD no Cervix (HeLa-S3) 21389898
chr1 229228744 229232100 ZNF274 GTRD no Cervix (HeLa-S3) 107877687
chr1 229228818 229230966 ZNF274 GTRD no Cervix (HeLa-S3) 21389899
chr1 229228818 229230966 ZNF274 GTRD no Cervix (HeLa-S3) 107877688
chr1 229228818 229232486 ZNF274 GTRD no Cervix (HeLa-S3) 21389900
chr1 229228818 229232486 ZNF274 GTRD no Cervix (HeLa-S3) 107877689
chr1 229228819 229229800 P63 GTRD no Skin (Keratinocyte) 107877690
chr1 229228830 229232022 ZBTB33 GTRD no Lung (A549) 107877691
chr1 229228836 229230038 ZNF143 GTRD no Epithelial (MCF-7) 21389901
chr1 229228836 229230038 ZNF143 GTRD no Epithelial (MCF-7) 107877692
chr1 229228852 229230474 ZBTB33 GTRD no Lung (A549) 107877693
chr1 229228864 229230358 ZNF274 GTRD no Cervix (HeLa-S3) 21389902
chr1 229228864 229230358 ZNF274 GTRD no Cervix (HeLa-S3) 107877694
chr1 229228864 229230913 ZNF274 GTRD no Cervix (HeLa-S3) 21389903
chr1 229228864 229230913 ZNF274 GTRD no Cervix (HeLa-S3) 107877695
chr1 229228872 229230315 ZNF143 GTRD no Epithelial (MCF-7) 21389904
chr1 229228872 229230315 ZNF143 GTRD no Epithelial (MCF-7) 107877696
chr1 229228877 229230213 ZNF274 GTRD no Cervix (HeLa-S3) 21389905
chr1 229228877 229230213 ZNF274 GTRD no Cervix (HeLa-S3) 107877697
chr1 229228877 229232149 ZBTB33 GTRD no Lung (A549) 107877698
chr1 229228880 229230208 ZNF143 GTRD no Epithelial (MCF-7) 21389906
chr1 229228880 229230208 ZNF143 GTRD no Epithelial (MCF-7) 107877699
chr1 229228881 229232191 ZBTB33 GTRD no Lung (A549) 107877700
chr1 229228896 229230160 ZNF274 GTRD no Cervix (HeLa-S3) 21389907
chr1 229228896 229230160 ZNF274 GTRD no Cervix (HeLa-S3) 107877701
chr1 229228899 229230130 ZNF143 GTRD no Epithelial (MCF-7) 21389908
chr1 229228899 229230130 ZNF143 GTRD no Epithelial (MCF-7) 107877702
chr1 229228899 229232080 ZNF274 GTRD no Cervix (HeLa-S3) 21389909
chr1 229228899 229232080 ZNF274 GTRD no Cervix (HeLa-S3) 107877703
chr1 229228926 229229684 ZNF143 GTRD no Epithelial (MCF-7) 21389911
chr1 229228926 229229684 ZNF143 GTRD no Epithelial (MCF-7) 107877705
chr1 229228948 229229562 ZNF274 GTRD no Cervix (HeLa-S3) 21389912
chr1 229228948 229229562 ZNF274 GTRD no Cervix (HeLa-S3) 107877706
chr1 229228959 229230212 ZNF274 GTRD no Cervix (HeLa-S3) 21389913
chr1 229228959 229230212 ZNF274 GTRD no Cervix (HeLa-S3) 107877707
chr1 229228970 229229558 ZNF143 GTRD no Epithelial (MCF-7) 21389914
chr1 229228970 229229558 ZNF143 GTRD no Epithelial (MCF-7) 107877708
chr1 229228986 229232108 ZNF274 GTRD no Cervix (HeLa-S3) 21389915
chr1 229228986 229232108 ZNF274 GTRD no Cervix (HeLa-S3) 107877710
chr1 229228990 229229803 ZBTB33 GTRD no Lung (A549) 107877711
chr1 229229008 229230445 ZBTB33 GTRD no Lung (A549) 107877713
chr1 229229012 229229625 ZNF143 GTRD no Epithelial (MCF-7) 21389917
chr1 229229012 229229625 ZNF143 GTRD no Epithelial (MCF-7) 107877714
chr1 229229053 229229594 ZNF143 GTRD no Epithelial (MCF-7) 21389918
chr1 229229053 229229594 ZNF143 GTRD no Epithelial (MCF-7) 107877715
chr1 229229059 229230076 ZNF143 GTRD no Epithelial (MCF-7) 21389919
chr1 229229059 229230076 ZNF143 GTRD no Epithelial (MCF-7) 107877716
chr1 229229064 229229582 ZBTB33 GTRD no Lung (A549) 107877717
chr1 229229070 229230096 ZNF274 GTRD no Cervix (HeLa-S3) 21389920
chr1 229229070 229230096 ZNF274 GTRD no Cervix (HeLa-S3) 107877718
chr1 229229077 229229684 ZNF143 GTRD no Epithelial (MCF-7) 21389921
chr1 229229077 229229684 ZNF143 GTRD no Epithelial (MCF-7) 107877719
chr1 229229085 229229725 ZNF143 GTRD no Epithelial (MCF-7) 21389922
chr1 229229085 229229725 ZNF143 GTRD no Epithelial (MCF-7) 107877720
chr1 229229097 229229767 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389923
chr1 229229097 229229767 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877721
chr1 229229108 229229722 ZNF143 GTRD no Epithelial (MCF-7) 21389925
chr1 229229108 229229722 ZNF143 GTRD no Epithelial (MCF-7) 107877723
chr1 229229111 229229686 ZNF143 GTRD no Epithelial (MCF-7) 21389926
chr1 229229111 229229686 ZNF143 GTRD no Epithelial (MCF-7) 107877724
chr1 229229148 229230132 ZNF274 GTRD no Cervix (HeLa-S3) 21389928
chr1 229229148 229230132 ZNF274 GTRD no Cervix (HeLa-S3) 107877726
chr1 229229197 229229777 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389929
chr1 229229197 229229777 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877727
chr1 229229254 229229718 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107877728
chr1 229229260 229230029 ZNF274 GTRD no Blood (GM12878) 107877729
chr1 229229281 229229801 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389930
chr1 229229281 229229801 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877730
chr1 229229299 229229969 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389931
chr1 229229299 229229969 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877731
chr1 229229325 229229661 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389932
chr1 229229325 229229661 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877732
chr1 229229338 229229648 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389933
chr1 229229338 229229648 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877733
chr1 229229356 229229600 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389934
chr1 229229356 229229600 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877734
chr1 229229361 229229565 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389935
chr1 229229361 229229565 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877735
chr1 229229361 229229631 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107877736
chr1 229229365 229229615 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389936
chr1 229229365 229229615 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877737
chr1 229229373 229230490 ZBTB33 GTRD no Lung (A549) 107877738
chr1 229229387 229229643 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389937
chr1 229229387 229229643 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877739
chr1 229229402 229230413 ZBTB33 GTRD no Lung (A549) 107877740
chr1 229229435 229229615 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389938
chr1 229229435 229229615 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877741
chr1 229229499 229229739 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21389939
chr1 229229499 229229739 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107877742
chr1 229229537 229229558 ZNF263 JASPAR yes 35959332
chr1 229229537 229229558 ZNF263 JASPAR yes 118475225
Genes associated with rs80034408[chr1:229229557], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More