EnhancerDB
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  3. rs80052189[chr16:81214127]
Enhancers that have rs80052189[chr16:81214127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 81205376 81217272 enh16834
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Lung (A549) Stomach Placenta Colon (HCT116) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs80052189[chr16:81214127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 81213841 81214451 TCF7L2 GTRD no Colon (HCT116) 21716887
chr16 81213875 81216456 TCF7L2 GTRD no Colon (HCT116) 21716888
chr16 81213907 81215561 TCF7L2 GTRD no Colon (HCT116) 21716889
chr16 81214114 81215011 ZNF143 GTRD no Epithelial (MCF-7) 21716890
chr16 81214116 81214131 MEF2A JASPAR yes 11813374
chr16 81214117 81214132 MEF2C JASPAR yes 11813375
chr16 81214118 81214130 MEF2A JASPAR yes 11813376
chr16 81214118 81214130 MEF2B JASPAR yes 11813377
chr16 81214118 81214130 MEF2D JASPAR yes 11813378
Genes associated with rs80052189[chr16:81214127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More