EnhancerDB
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  3. rs80107484[chr2:228266039]
Enhancers that have rs80107484[chr2:228266039]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 228254625 228287055 enh19284
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs80107484[chr2:228266039]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 228266019 228266040 IRF1 JASPAR yes 81518987
chr2 228266021 228266042 IRF1 JASPAR yes 81518990
chr2 228266022 228266043 IRF1 JASPAR yes 81518992
chr2 228266028 228266049 IRF1 JASPAR yes 81518994
chr2 228266030 228266045 IRF9 JASPAR yes 81518995
chr2 228266031 228266045 IRF7 JASPAR yes 81518996
chr2 228266031 228266045 ONECUT1 JASPAR yes 81518997
chr2 228266031 228266045 ONECUT2 JASPAR yes 81518998
chr2 228266031 228266045 ONECUT3 JASPAR yes 81518999
chr2 228266032 228266047 STAT2 JASPAR yes 81519000
chr2 228266033 228266045 IRF1 JASPAR yes 81519001
Genes associated with rs80107484[chr2:228266039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More