EnhancerDB
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  3. rs80108540[chr1:225642627]
Enhancers that have rs80108540[chr1:225642627]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225626185 225658051 enh950
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 225642606 225642805 vista5318
VISTA
Transcript factors that have rs80108540[chr1:225642627]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225642008 225642664 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107874193
chr1 225642312 225642828 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384765
chr1 225642312 225642828 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874194
chr1 225642384 225642840 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384766
chr1 225642384 225642840 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874195
chr1 225642398 225642862 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21384767
chr1 225642398 225642862 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107874196
chr1 225642402 225642778 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21384768
chr1 225642402 225642778 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107874197
chr1 225642416 225642856 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384769
chr1 225642416 225642856 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874198
chr1 225642423 225642764 ZNF143 GTRD no Epithelial (MCF-7) 21384770
chr1 225642423 225642764 ZNF143 GTRD no Epithelial (MCF-7) 107874199
chr1 225642428 225642758 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384771
chr1 225642428 225642758 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874200
chr1 225642438 225642834 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384772
chr1 225642438 225642834 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874201
chr1 225642446 225642846 FOS UCSC Txn Factor no Conserved 107874202
chr1 225642450 225642826 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384773
chr1 225642450 225642826 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874203
chr1 225642452 225642848 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384774
chr1 225642452 225642848 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874204
chr1 225642458 225642814 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21384775
chr1 225642458 225642814 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107874205
chr1 225642471 225642855 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384776
chr1 225642471 225642855 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874206
chr1 225642483 225642853 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384777
chr1 225642483 225642853 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874207
chr1 225642488 225642828 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384778
chr1 225642488 225642828 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874208
chr1 225642488 225642892 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384779
chr1 225642488 225642892 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874209
chr1 225642495 225642771 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21384780
chr1 225642495 225642771 JUND UCSC Txn Factor no Conserved 107874210
chr1 225642495 225642771 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107874211
chr1 225642495 225642825 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384781
chr1 225642495 225642825 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874212
chr1 225642499 225642789 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21384782
chr1 225642499 225642789 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107874213
chr1 225642507 225642777 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384783
chr1 225642507 225642777 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874214
chr1 225642512 225642796 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384784
chr1 225642512 225642796 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874215
chr1 225642522 225642786 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384785
chr1 225642522 225642786 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874216
chr1 225642525 225642781 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384786
chr1 225642525 225642781 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874217
chr1 225642533 225642748 FOSL2 UCSC Txn Factor no Conserved 107874218
chr1 225642533 225642748 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107874219
chr1 225642538 225642782 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384787
chr1 225642538 225642782 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874220
chr1 225642549 225642809 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384788
chr1 225642549 225642809 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874221
chr1 225642565 225642724 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21384789
chr1 225642565 225642724 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107874222
chr1 225642570 225642682 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384790
chr1 225642570 225642682 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874223
chr1 225642572 225642724 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384791
chr1 225642572 225642724 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874224
chr1 225642579 225642711 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384792
chr1 225642579 225642711 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874225
chr1 225642590 225642713 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21384793
chr1 225642590 225642713 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107874226
chr1 225642595 225642875 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21384794
chr1 225642595 225642875 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107874227
chr1 225642616 225642873 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21384795
chr1 225642616 225642873 EGR1 UCSC Txn Factor no Conserved 107874228
chr1 225642616 225642873 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107874229
Genes associated with rs80108540[chr1:225642627], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More