EnhancerDB
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  3. rs80156290[chr17:79552079]
Enhancers that have rs80156290[chr17:79552079]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79539405 79553215 enh32380
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs80156290[chr17:79552079]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79552067 79552086 RFX2 JASPAR yes 56335573
chr17 79552071 79552087 RFX2 JASPAR yes 56335574
chr17 79552071 79552087 RFX3 JASPAR yes 56335575
chr17 79552071 79552087 RFX4 JASPAR yes 56335576
chr17 79552072 79552091 RFX2 JASPAR yes 56335577
Genes associated with rs80156290[chr17:79552079], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More