EnhancerDB
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  3. rs80171368[chr17:55498616]
Enhancers that have rs80171368[chr17:55498616]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs80171368[chr17:55498616]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55498603 55498617 TLX1 JASPAR yes 54953577
chr17 55498604 55498618 TLX1 JASPAR yes 54953578
Genes associated with rs80171368[chr17:55498616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 54869274 54916134 - C17orf67 ENSG00000214226.4 54916134 582482 Adrenal 0.227336 16066