EnhancerDB
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  3. rs80241654[chr6:11318560]
Enhancers that have rs80241654[chr6:11318560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11314009 11328675 enh23020
Astrocyte Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
chr6 11318376 11319012 vista50805
VISTA
Transcript factors that have rs80241654[chr6:11318560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11318497 11319006 EP300 UCSC Txn Factor no Conserved 108538373
chr6 11318513 11319003 TCF12 UCSC Txn Factor no Conserved 108538374
chr6 11318550 11319000 FOSL2 UCSC Txn Factor no Conserved 108538375
chr6 11318553 11318565 YY1 JASPAR yes 70308064
chr6 11318553 11318565 YY1 JASPAR yes 99875406
chr6 11318554 11318575 IRF1 JASPAR yes 70308065
chr6 11318554 11318575 IRF1 JASPAR yes 99875407
chr6 11318555 11318570 FOXP1 JASPAR yes 70308066
chr6 11318555 11318570 FOXP1 JASPAR yes 99875408
chr6 11318555 11318576 IRF1 JASPAR yes 70308067
chr6 11318555 11318576 IRF1 JASPAR yes 99875409
chr6 11318556 11318566 NFATC3 JASPAR yes 70308068
chr6 11318556 11318566 NFATC3 JASPAR yes 99875410
chr6 11318558 11318565 NFATC2 JASPAR yes 70308069
chr6 11318558 11318565 NFATC2 JASPAR yes 99875411
chr6 11318559 11318574 STAT2 JASPAR yes 70308070
chr6 11318559 11318574 STAT2 JASPAR yes 99875412
chr6 11318560 11318575 FOXP1 JASPAR yes 70308071
chr6 11318560 11318575 FOXP1 JASPAR yes 99875413
Genes associated with rs80241654[chr6:11318560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More