EnhancerDB
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  3. rs80296398[chr17:56071666]
Enhancers that have rs80296398[chr17:56071666]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 56068785 56080363 enh4497
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs80296398[chr17:56071666]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56071666 56071676 TBX21 JASPAR yes 55004783
chr17 56071666 56071677 TBX20 JASPAR yes 55004784
chr17 56071666 56071677 TBX2 JASPAR yes 55004785
chr17 56071666 56071679 EOMES JASPAR yes 55004786
Genes associated with rs80296398[chr17:56071666], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More