EnhancerDB
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  3. rs80308000[chr15:41092886]
Enhancers that have rs80308000[chr15:41092886]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41072825 41093715 enh16067
Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs80308000[chr15:41092886]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41092879 41092890 HOXA10 JASPAR yes 22956041
chr15 41092880 41092890 HOXD13 JASPAR yes 22956042
chr15 41092881 41092891 HOXA13 JASPAR yes 22956043
chr15 41092881 41092891 HOXB13 JASPAR yes 22956044
chr15 41092881 41092891 HOXD13 JASPAR yes 22956045
chr15 41092882 41092886 YY1 TRANSFAC yes 22956046
chr15 41092883 41092898 FOXP1 JASPAR yes 22956047
chr15 41092884 41092899 FOXP1 JASPAR yes 22956048
chr15 41092885 41092891 TBP TRANSFAC yes 22956049
Genes associated with rs80308000[chr15:41092886], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More