EnhancerDB
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  3. rs8050036[chr16:87816920]
Enhancers that have rs8050036[chr16:87816920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 87806255 87830395 enh4179
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs8050036[chr16:87816920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 87815129 87817005 ZNF143 GTRD no Epithelial (MCF-7) 21734424
chr16 87815140 87817013 ZNF143 GTRD no Epithelial (MCF-7) 21734425
chr16 87816509 87817008 TCF7L2 GTRD no Colon (HCT116) 21734463
chr16 87816557 87817077 MYOD GTRD no Muscle (Myoblast) 21734464
chr16 87816772 87817145 ZNF274 GTRD no Blood (GM12878) 21734465
chr16 87816912 87816922 GCM2 JASPAR yes 12238853
chr16 87816913 87816927 EBF1 JASPAR yes 12238854
Genes associated with rs8050036[chr16:87816920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More