EnhancerDB
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  3. rs8080778[chr17:38682200]
Enhancers that have rs8080778[chr17:38682200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs8080778[chr17:38682200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38682190 38682459 ZNF274 GTRD no Liver (HepG2) 21754985
chr17 38682197 38682218 IRF1 JASPAR yes 54221607
chr17 38682200 38682204 YY1 TRANSFAC yes 54221608
Genes associated with rs8080778[chr17:38682200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More