EnhancerDB
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  3. rs8112141[chr19:13286626]
Enhancers that have rs8112141[chr19:13286626]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13265805 13289518 enh17931
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs8112141[chr19:13286626]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13286250 13286800 TCF7L2 GTRD no Colon (HCT116) 21851482
chr19 13286289 13287003 ZNF143 GTRD no Epithelial (MCF-7) 21851483
chr19 13286316 13287044 TCF7L2 GTRD no Colon (HCT116) 21851484
chr19 13286373 13287102 TCF7L2 GTRD no Colon (HCT116) 21851485
chr19 13286620 13286630 HOXA13 JASPAR yes 112516145
chr19 13286620 13286630 HOXB13 JASPAR yes 112516146
chr19 13286620 13286630 HOXD13 JASPAR yes 112516147
chr19 13286620 13286631 HOXA10 JASPAR yes 112516148
chr19 13286621 13286630 CDX1 JASPAR yes 112516149
chr19 13286621 13286632 CDX2 JASPAR yes 112516150
chr19 13286622 13286634 MEF2A JASPAR yes 112516151
chr19 13286622 13286634 MEF2B JASPAR yes 112516152
chr19 13286622 13286634 MEF2D JASPAR yes 112516153
chr19 13286626 13286647 IRF1 JASPAR yes 112516154
Genes associated with rs8112141[chr19:13286626], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More