EnhancerDB
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  3. rs829589[chr2:30623330]
Enhancers that have rs829589[chr2:30623330]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 30621325 30653955 enh33182
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs829589[chr2:30623330]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 30623309 30623330 IRF1 JASPAR yes 72765258
chr2 30623312 30623333 IRF1 JASPAR yes 72765263
chr2 30623315 30623330 FOXP1 JASPAR yes 72765265
chr2 30623316 30623331 FOXP1 JASPAR yes 72765266
chr2 30623317 30623332 FOXP1 JASPAR yes 72765267
chr2 30623318 30623333 FOXP1 JASPAR yes 72765268
chr2 30623319 30623334 FOXP1 JASPAR yes 72765269
chr2 30623320 30623335 FOXP1 JASPAR yes 72765270
Genes associated with rs829589[chr2:30623330], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More