EnhancerDB
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  3. rs829591[chr2:30642100]
Enhancers that have rs829591[chr2:30642100]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 30621325 30653955 enh33182
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs829591[chr2:30642100]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 30642090 30642105 HNF1A JASPAR yes 72767990
chr2 30642098 30642108 ALX3 JASPAR yes 72767991
chr2 30642098 30642108 ESX1 JASPAR yes 72767992
chr2 30642098 30642108 GSX2 JASPAR yes 72767993
chr2 30642098 30642108 HESX1 JASPAR yes 72767994
chr2 30642098 30642108 LHX6 JASPAR yes 72767995
chr2 30642098 30642108 MIXL1 JASPAR yes 72767996
chr2 30642098 30642108 MNX1 JASPAR yes 72767997
chr2 30642098 30642108 NOTO JASPAR yes 72767998
chr2 30642098 30642108 RAX JASPAR yes 72767999
chr2 30642098 30642109 HOXA10 JASPAR yes 72768000
chr2 30642099 30642107 ISX JASPAR yes 72768001
chr2 30642099 30642107 LMX1A JASPAR yes 72768002
chr2 30642099 30642107 LMX1B JASPAR yes 72768003
chr2 30642099 30642107 NKX6-1 JASPAR yes 72768004
chr2 30642099 30642107 NKX6-2 JASPAR yes 72768005
chr2 30642099 30642107 PRRX1 JASPAR yes 72768006
chr2 30642099 30642107 RAX2 JASPAR yes 72768007
chr2 30642099 30642107 SHOX JASPAR yes 72768008
chr2 30642099 30642107 UNCX JASPAR yes 72768009
chr2 30642099 30642107 VAX1 JASPAR yes 72768010
Genes associated with rs829591[chr2:30642100], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More