EnhancerDB
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  3. rs835489[chr12:105062195]
Enhancers that have rs835489[chr12:105062195]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 105058565 105083795 enh14949
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 105061987 105062372 vista14724
VISTA
Transcript factors that have rs835489[chr12:105062195]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 105062168 105062612 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21569636
chr12 105062168 105062612 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108055544
chr12 105062187 105062203 RFX2 JASPAR yes 82469069
chr12 105062187 105062203 RFX3 JASPAR yes 82469070
chr12 105062187 105062203 RFX4 JASPAR yes 82469071
chr12 105062187 105062203 RFX2 JASPAR yes 123405111
chr12 105062187 105062203 RFX3 JASPAR yes 123405112
chr12 105062187 105062203 RFX4 JASPAR yes 123405113
chr12 105062188 105062207 RFX2 JASPAR yes 82469072
chr12 105062188 105062207 RFX2 JASPAR yes 123405114
chr12 105062190 105062205 RFX5 JASPAR yes 82469073
chr12 105062190 105062205 RFX5 JASPAR yes 123405115
Genes associated with rs835489[chr12:105062195], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More