EnhancerDB
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  3. rs837480[chr12:125029792]
Enhancers that have rs837480[chr12:125029792]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs837480[chr12:125029792]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125029328 125030409 ZNF274 GTRD no Blood (GM12878) 21580966
chr12 125029328 125030409 ZNF274 GTRD no Blood (GM12878) 108068849
chr12 125029524 125030285 ZNF274 GTRD no Blood (GM12878) 21580967
chr12 125029524 125030285 ZNF274 GTRD no Blood (GM12878) 108068850
chr12 125029575 125030304 ZNF274 GTRD no Blood (GM12878) 21580968
chr12 125029575 125030304 ZNF274 GTRD no Blood (GM12878) 108068851
chr12 125029649 125030210 ZNF274 GTRD no Blood (GM12878) 21580969
chr12 125029649 125030210 ZNF274 GTRD no Blood (GM12878) 108068852
chr12 125029680 125030213 MYOD GTRD no Muscle (Myoblast) 21580970
chr12 125029680 125030213 MYOD GTRD no Muscle (Myoblast) 108068853
chr12 125029777 125030233 SOX2 GTRD no Neural Stem Cells (H9) 108068854
chr12 125029787 125029792 GATA2 JASPAR yes 124392032
Genes associated with rs837480[chr12:125029792], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr12 124069078 124083116 + TMED2 ENSG00000086598.6 124069078 946676 Lung 0.0161611 12668