EnhancerDB
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  3. rs838488[chr12:125167520]
Enhancers that have rs838488[chr12:125167520]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125156845 125176489 enh15094
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 125167246 125167625 vista15316
VISTA
Transcript factors that have rs838488[chr12:125167520]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125167227 125167757 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581677
chr12 125167227 125167757 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069414
chr12 125167261 125167777 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581678
chr12 125167261 125167777 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069415
chr12 125167338 125167709 ZBTB33 GTRD no Lung (A549) 108069416
chr12 125167407 125167623 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108069417
chr12 125167430 125167960 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581679
chr12 125167430 125167960 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069418
chr12 125167510 125167520 ID4 JASPAR yes 82497047
chr12 125167510 125167520 TCF3 JASPAR yes 82497048
chr12 125167510 125167520 TCF4 JASPAR yes 82497049
chr12 125167510 125167520 ID4 JASPAR yes 124408230
chr12 125167510 125167520 TCF3 JASPAR yes 124408231
chr12 125167510 125167520 TCF4 JASPAR yes 124408232
chr12 125167511 125167520 SNAI2 JASPAR yes 82497050
chr12 125167511 125167520 SNAI2 JASPAR yes 124408233
chr12 125167518 125167537 CTCF JASPAR yes 82497052
chr12 125167518 125167537 CTCF JASPAR yes 124408235
Genes associated with rs838488[chr12:125167520], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More