EnhancerDB
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  3. rs846996[chr6:107998198]
Enhancers that have rs846996[chr6:107998198]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 107984585 108002855 enh9300
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Astrocyte Bone (Osteoblast) Colon (HCT116) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Stomach
Transcript factors that have rs846996[chr6:107998198]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 107998195 107998203 ISX JASPAR yes 104129425
chr6 107998195 107998203 LHX9 JASPAR yes 104129426
chr6 107998195 107998203 LMX1B JASPAR yes 104129427
chr6 107998195 107998203 PRRX1 JASPAR yes 104129428
chr6 107998195 107998203 RAX2 JASPAR yes 104129429
chr6 107998195 107998203 SHOX JASPAR yes 104129430
chr6 107998195 107998203 UNCX JASPAR yes 104129431
chr6 107998196 107998206 PAX3 JASPAR yes 104129432
Genes associated with rs846996[chr6:107998198], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More