EnhancerDB
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  3. rs869256921[chr1:54782334]
Enhancers that have rs869256921[chr1:54782334]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54761072 54782679 enh11866
Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs869256921[chr1:54782334]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54782322 54782337 FOXP1 JASPAR yes 28972567
chr1 54782322 54782343 IRF1 JASPAR yes 28972568
chr1 54782324 54782336 FOXC2 JASPAR yes 28972569
chr1 54782331 54782345 ONECUT2 JASPAR yes 28972570
chr1 54782331 54782345 ONECUT3 JASPAR yes 28972571
chr1 54782331 54782346 FOXP1 JASPAR yes 28972572
chr1 54782332 54782347 FOXA1 JASPAR yes 28972573
chr1 54782333 54782344 FOXB1 JASPAR yes 28972574
chr1 54782333 54782344 FOXC1 JASPAR yes 28972575
chr1 54782333 54782345 FOXC2 JASPAR yes 28972576
chr1 54782334 54782346 FOXI1 JASPAR yes 28972577
Genes associated with rs869256921[chr1:54782334], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More