EnhancerDB
  1. Home
  2. SNP
  3. rs871275[chr1:229545782]
Enhancers that have rs871275[chr1:229545782]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229540746 229550075 enh12766
Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Stomach Placenta Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs871275[chr1:229545782]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229545777 229545784 NKX3-1 JASPAR yes 35987098
chr1 229545778 229545797 REST JASPAR yes 35987099
chr1 229545782 229545787 GATA2 JASPAR yes 35987100
Genes associated with rs871275[chr1:229545782], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More