EnhancerDB
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  3. rs877480[chr15:58767425]
Enhancers that have rs877480[chr15:58767425]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 58744595 58771635 enh16176
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs877480[chr15:58767425]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 58767410 58767425 HNF4A JASPAR yes 23678604
chr15 58767411 58767426 HNF4G JASPAR yes 23678605
chr15 58767419 58767438 RFX2 JASPAR yes 23678606
chr15 58767421 58767436 RFX5 JASPAR yes 23678607
Genes associated with rs877480[chr15:58767425], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More