EnhancerDB
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Enhancers that have rs879776[chr10:28612555]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 28608755 28618815 enh27938
Epithelial (MCF-7) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung Blood (OCI-LY7) Stomach Colon (HCT116) Uterus Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs879776[chr10:28612555]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 28612539 28612557 RARA JASPAR yes 126223075
chr10 28612549 28612559 MAX JASPAR yes 126223076
chr10 28612549 28612560 USF1 JASPAR yes 126223077
chr10 28612549 28612560 USF2 JASPAR yes 126223078
chr10 28612550 28612560 BHLHE40 JASPAR yes 126223079
chr10 28612550 28612560 BHLHE41 JASPAR yes 126223080
chr10 28612550 28612560 MLXIPL JASPAR yes 126223081
chr10 28612550 28612560 MLX JASPAR yes 126223082
chr10 28612550 28612560 SREBF2 JASPAR yes 126223083
chr10 28612550 28612560 TFE3 JASPAR yes 126223084
chr10 28612550 28612560 TFEB JASPAR yes 126223085
chr10 28612550 28612560 TFEC JASPAR yes 126223086
chr10 28612552 28612557 MYC TRANSFAC yes 126223087
chr10 28612552 28612557 USF1 TRANSFAC yes 126223088
chr10 28612552 28612557 USF2 TRANSFAC yes 126223089
Genes associated with rs879776[chr10:28612555], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More