EnhancerDB
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  3. rs906275[chr1:154724127]
Enhancers that have rs906275[chr1:154724127]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154711786 154726515 enh27142
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs906275[chr1:154724127]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154723936 154724246 ZNF143 GTRD no Epithelial (MCF-7) 21340723
chr1 154723936 154724246 ZNF143 GTRD no Epithelial (MCF-7) 107833256
chr1 154724114 154724133 RFX2 JASPAR yes 32307353
chr1 154724118 154724134 RFX2 JASPAR yes 32307354
chr1 154724118 154724134 RFX3 JASPAR yes 32307355
chr1 154724118 154724134 RFX4 JASPAR yes 32307356
chr1 154724118 154724134 RFX5 JASPAR yes 32307357
chr1 154724119 154724138 RFX2 JASPAR yes 32307358
Genes associated with rs906275[chr1:154724127], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More