EnhancerDB
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  3. rs9356956[chr6:25027669]
Enhancers that have rs9356956[chr6:25027669]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 24994525 25030795 enh9006
Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
chr6 25027478 25027700 vista51364
VISTA
Transcript factors that have rs9356956[chr6:25027669]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25027371 25027795 CTCF UCSC Txn Factor no Conserved 108539108
chr6 25027446 25027710 RAD21 UCSC Txn Factor no Conserved 108539109
chr6 25027447 25027717 SMC3 UCSC Txn Factor no Conserved 108539110
chr6 25027667 25027671 TEAD2 TRANSFAC yes 70336201
chr6 25027667 25027671 TEAD2 TRANSFAC yes 100815691
chr6 25027667 25027672 TBP TRANSFAC yes 70336202
chr6 25027667 25027672 TBP TRANSFAC yes 100815692
chr6 25027668 25027676 FOXG1 JASPAR yes 70336203
chr6 25027668 25027676 FOXG1 JASPAR yes 100815693
chr6 25027669 25027677 FOXL1 JASPAR yes 70336204
chr6 25027669 25027677 FOXL1 JASPAR yes 100815694
Genes associated with rs9356956[chr6:25027669], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More