EnhancerDB
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  3. rs9394359[chr6:36550340]
Enhancers that have rs9394359[chr6:36550340]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36532405 36555595 enh23192
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs9394359[chr6:36550340]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36550330 36550343 SMAD2 JASPAR yes 101346501
chr6 36550333 36550343 TBR1 JASPAR yes 101346502
chr6 36550334 36550344 TBX21 JASPAR yes 101346503
chr6 36550335 36550343 MGA JASPAR yes 101346504
chr6 36550335 36550343 TBX15 JASPAR yes 101346505
chr6 36550335 36550343 TBX1 JASPAR yes 101346506
chr6 36550335 36550343 TBX4 JASPAR yes 101346507
chr6 36550335 36550343 TBX5 JASPAR yes 101346508
chr6 36550335 36550344 ZEB1 JASPAR yes 101346509
chr6 36550335 36550347 PKNOX1 JASPAR yes 101346510
chr6 36550335 36550347 TGIF1 JASPAR yes 101346511
chr6 36550335 36550348 ZBTB18 JASPAR yes 101346512
chr6 36550336 36550346 FIGLA JASPAR yes 101346513
chr6 36550336 36550346 ID4 JASPAR yes 101346514
chr6 36550336 36550346 TCF3 JASPAR yes 101346515
chr6 36550336 36550346 TCF4 JASPAR yes 101346516
chr6 36550337 36550346 SNAI2 JASPAR yes 101346517
chr6 36550338 36550343 USF2 TRANSFAC yes 101346518
Genes associated with rs9394359[chr6:36550340], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More